CloneSet55


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
14410.997stmt_list[7]
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
114505
Bio/Graphics/GenomeDiagram/_CircularDrawer.py
213560
Bio/Graphics/GenomeDiagram/_CircularDrawer.py
314860
Bio/Graphics/GenomeDiagram/_LinearDrawer.py
4131005
Bio/Graphics/GenomeDiagram/_LinearDrawer.py
Clone Instance
1
Line Count
14
Source Line
505
Source File
Bio/Graphics/GenomeDiagram/_CircularDrawer.py

        minval,maxval =  data_quartiles[0],data_quartiles[4] 
        btm,ctr,top =   self.track_radii[self.current_track_level] 
        trackheight = 0.5*(top-btm) 
        datarange = maxval-minval 
        if datarange==0:  
            datarange = trackheight 
        data = graph[self.start:self.end] 

        # midval is the value at which the x-axis is plotted, and is the
        # central ring in the track
        if graph.center is None: 
             midval = (maxval+minval)/2. 
        else: 
             midval = graph.center 
         # Whichever is the greatest difference: max-midval or min-midval, is
         # taken to specify the number of pixel units resolved along the
         # y-axis


Clone Instance
2
Line Count
13
Source Line
560
Source File
Bio/Graphics/GenomeDiagram/_CircularDrawer.py

        minval,maxval =  data_quartiles[0],data_quartiles[4] 
        btm,ctr,top =   self.track_radii[self.current_track_level] 
        trackheight = 0.5*(top-btm) 
        datarange = maxval-minval 
        if datarange==0:  
            datarange = trackheight 
        data = graph[self.start:self.end] 
        # midval is the value at which the x-axis is plotted, and is the
        # central ring in the track
        if graph.center is None: 
             midval = (maxval+minval)/2. 
        else: 
             midval = graph.center 

         # Convert data into 'binned' blocks, covering half the distance to the
         # next data point on either side, accounting for the ends of fragments
         # and tracks


Clone Instance
3
Line Count
14
Source Line
860
Source File
Bio/Graphics/GenomeDiagram/_LinearDrawer.py

        minval,maxval =  data_quartiles[0],data_quartiles[4] 
        btm,ctr,top =   self.track_offsets[self.current_track_level] 
        trackheight = 0.5*(top-btm) 
        datarange = maxval-minval 
        if datarange==0:  
            datarange = trackheight 
        data = graph[self.start:self.end] 

        # midval is the value at which the x-axis is plotted, and is the
        # central ring in the track
        if graph.center is None: 
             midval = (maxval+minval)/2. 
        else: 
             midval = graph.center 
         # Whichever is the greatest difference: max-midval or min-midval, is
         # taken to specify the number of pixel units resolved along the
         # y-axis


Clone Instance
4
Line Count
13
Source Line
1005
Source File
Bio/Graphics/GenomeDiagram/_LinearDrawer.py

        minval,maxval =  data_quartiles[0],data_quartiles[4] 
        btm,ctr,top =   self.track_offsets[self.current_track_level] 
        trackheight = 0.5*(top-btm) 
        datarange = maxval-minval 
        if datarange==0:  
            datarange = trackheight 
        data = graph[self.start:self.end] 
        # midval is the value at which the x-axis is plotted, and is the
        # central ring in the track
        if graph.center is None: 
             midval = (maxval+minval)/2. 
        else: 
             midval = graph.center 

         # Convert data into 'binned' blocks, covering half the distance to the
         # next data point on either side, accounting for the ends of fragments
         # and tracks


Clone AbstractionParameter Count: 1Parameter Bindings

minval,maxval = data_quartiles[0],data_quartiles[4] 
btm,ctr,top = self. [[#variable77428400]][self.current_track_level] 
trackheight = 0.5*(top-btm) 
datarange = maxval-minval 
if datarange==0:
  datarange = trackheight 
data = graph[self.start:self.end] 
# midval is the value at which the x-axis is plotted, and is the
# central ring in the track
if graph.center is None:
  midval = (maxval+minval)/2. 
else:
  midval = graph.center 
  # Whichever is the greatest difference: max-midval or min-midval, is
  # taken to specify the number of pixel units resolved along the
  # y-axis
  # Convert data into 'binned' blocks, covering half the distance to the
  # next data point on either side, accounting for the ends of fragments
  # and tracks
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#77428400]]
track_offsets 
12[[#77428400]]
track_radii 
13[[#77428400]]
track_offsets 
14[[#77428400]]
track_radii