CloneSet16


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
16660.979test_pair_plus
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
116318
Bio/Restriction/Restriction_Dictionary.py
2161572
Bio/Restriction/Restriction_Dictionary.py
3161589
Bio/Restriction/Restriction_Dictionary.py
4162209
Bio/Restriction/Restriction_Dictionary.py
5162311
Bio/Restriction/Restriction_Dictionary.py
6162906
Bio/Restriction/Restriction_Dictionary.py
Clone Instance
1
Line Count
16
Source Line
318
Source File
Bio/Restriction/Restriction_Dictionary.py

          "charac":(22,14,None,None,"CTGAAG"),"compsite":"(?P<AcuI>CTGAAG)|(?P<AcuI_as>CTTCAG)","dna":None,"freq":4096,"fst3":14,"fst5":22,"inact_temp":65,"opt_temp":37,"ovhg":2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"CTGAAG","size":6,"substrat":"DNA"


Clone Instance
2
Line Count
16
Source Line
1572
Source File
Bio/Restriction/Restriction_Dictionary.py

            "charac":(22,14,None,None,"CTTGAG"),"compsite":"(?P<Bce83I>CTTGAG)|(?P<Bce83I_as>CTCAAG)","dna":None,"freq":4096,"fst3":14,"fst5":22,"inact_temp":65,"opt_temp":37,"ovhg":2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"CTTGAG","size":6,"substrat":"DNA"


Clone Instance
3
Line Count
16
Source Line
1589
Source File
Bio/Restriction/Restriction_Dictionary.py

           "charac":(17,14,None,None,"ACGGC"),"compsite":"(?P<BceAI>ACGGC)|(?P<BceAI_as>GCCGT)","dna":None,"freq":1024,"fst3":14,"fst5":17,"inact_temp":65,"opt_temp":37,"ovhg": -2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"ACGGC","size":5,"substrat":"DNA"


Clone Instance
4
Line Count
16
Source Line
2209
Source File
Bio/Restriction/Restriction_Dictionary.py

          "charac":(22,14,None,None,"CTGGAG"),"compsite":"(?P<BpmI>CTGGAG)|(?P<BpmI_as>CTCCAG)","dna":None,"freq":4096,"fst3":14,"fst5":22,"inact_temp":65,"opt_temp":37,"ovhg":2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"CTGGAG","size":6,"substrat":"DNA"


Clone Instance
5
Line Count
16
Source Line
2311
Source File
Bio/Restriction/Restriction_Dictionary.py

           "charac":(22,14,None,None,"CTTGAG"),"compsite":"(?P<BpuEI>CTTGAG)|(?P<BpuEI_as>CTCAAG)","dna":None,"freq":4096,"fst3":14,"fst5":22,"inact_temp":65,"opt_temp":37,"ovhg":2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"CTTGAG","size":6,"substrat":"DNA"


Clone Instance
6
Line Count
16
Source Line
2906
Source File
Bio/Restriction/Restriction_Dictionary.py

          "charac":(22,14,None,None,"GTGCAG"),"compsite":"(?P<BsgI>GTGCAG)|(?P<BsgI_as>CTGCAC)","dna":None,"freq":4096,"fst3":14,"fst5":22,"inact_temp":65,"opt_temp":37,"ovhg":2,"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site":"GTGCAG","size":6,"substrat":"DNA"


Clone AbstractionParameter Count: 6Parameter Bindings

"charac":( [[#variable6007b260]],14,None,None, [[#variable6007b1c0]]),"compsite": [[#variable6007b140]],"dna":None,"freq": [[#variable6007b0a0]],"fst3":14,"fst5": [[#variable6007b260]],"inact_temp":65,"opt_temp":37,"ovhg": [[#variable6007afe0]],"ovhgseq":"NN","results":None,"scd3":None,"scd5":None,"site": [[#variable6007b1c0]],"size": [[#variable6007aea0]],"substrat":"DNA"
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#6007b260]]
22 
12[[#6007b260]]
22 
13[[#6007b260]]
17 
14[[#6007b260]]
22 
15[[#6007b260]]
22 
16[[#6007b260]]
22 
21[[#6007b1c0]]
"CTGAAG" 
22[[#6007b1c0]]
"CTTGAG" 
23[[#6007b1c0]]
"ACGGC" 
24[[#6007b1c0]]
"GTGCAG" 
25[[#6007b1c0]]
"CTTGAG" 
26[[#6007b1c0]]
"CTGGAG" 
31[[#6007b140]]
"(?P<AcuI>CTGAAG)|(?P<AcuI_as>CTTCAG)" 
32[[#6007b140]]
"(?P<Bce83I>CTTGAG)|(?P<Bce83I_as>CTCAAG)" 
33[[#6007b140]]
"(?P<BceAI>ACGGC)|(?P<BceAI_as>GCCGT)" 
34[[#6007b140]]
"(?P<BsgI>GTGCAG)|(?P<BsgI_as>CTGCAC)" 
35[[#6007b140]]
"(?P<BpuEI>CTTGAG)|(?P<BpuEI_as>CTCAAG)" 
36[[#6007b140]]
"(?P<BpmI>CTGGAG)|(?P<BpmI_as>CTCCAG)" 
41[[#6007b0a0]]
4096 
42[[#6007b0a0]]
4096 
43[[#6007b0a0]]
1024 
44[[#6007b0a0]]
4096 
45[[#6007b0a0]]
4096 
46[[#6007b0a0]]
4096 
51[[#6007afe0]]
2 
52[[#6007afe0]]
2 
53[[#6007afe0]]
-2 
54[[#6007afe0]]
2 
55[[#6007afe0]]
2 
56[[#6007afe0]]
2 
61[[#6007aea0]]
6 
62[[#6007aea0]]
6 
63[[#6007aea0]]
5 
64[[#6007aea0]]
6 
65[[#6007aea0]]
6 
66[[#6007aea0]]
6